[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 27 items for (author: derking & r)

EMDB-22170:
BG505 SOSIPv5.2 in complex with PGT122 and two RM20E1 Fabs
Method: single particle / : Cottrell CA, Ward AB

EMDB-22171:
BG505 SOSIPv5.2 in complex with PGT122 and three RM20E1 Fabs
Method: single particle / : Cottrell CA, Ward AB

EMDB-22172:
C3 symmetric BG505 SOSIPv5.2 in complex with PGT122 and three RM20E1 Fabs
Method: single particle / : Cottrell CA, Ward AB

EMDB-22173:
BG505 SOSIPv5.2 in complex with PGT122 and one RM20E1 Fab
Method: single particle / : Cottrell CA, Ward AB

EMDB-22178:
BG505 SOSIPv5.2 in complex with PGT122 and no RM20E1 Fabs
Method: single particle / : Cottrell CA, Ward AB

EMDB-22179:
C3 symmetric BG505 SOSIPv5.2 in complex with PGT122 and no RM20E1 Fabs
Method: single particle / : Cottrell CA, Ward AB

EMDB-22061:
negative stain EM map of SARS-CoV-2 spike in complex with COVA2-15 Fab
Method: single particle / : Ward AB, Bangaru S, Torres JL

EMDB-22062:
negative stain EM map of SARS-CoV-2 spike in complex with COVA1-22
Method: single particle / : Ward AB, Bangaru S, Torres JL

EMDB-22063:
negative stain EM map of SARS-CoV-2 spike in complex with COVA2-07
Method: single particle / : Ward AB, Bangaru S, Torres JL

EMDB-22064:
negative stain EM map of SARS-CoV-2 spike in complex with COVA2-39 Fab
Method: single particle / : Ward AB, Bangaru S, Torres JL

EMDB-22065:
negative stain EM map of SARS-CoV-2 spike in complex with COVA2-04 Fab
Method: single particle / : Ward AB, Bangaru S, Torres JL

EMDB-22066:
negative stain EM map of SARS-CoV-2 spike in complex with COVA1-12 Fab
Method: single particle / : Ward AB, Bangaru S, Torres JL

EMDB-3067:
cryoEM reconstruction of 3BC315 Fab in complex with BG505 SOSIP.664 Env trimer
Method: single particle / : Lee JH, Ward AB

EMDB-2853:
3BNC117 Fab in complex with BG505 SOSIP.664 Trimer
Method: single particle / : Ozorowski G, Derking R, Sanders RW, Ward AB

EMDB-6249:
1NC9 Fab in complex with BG505 SOSIP.664 Trimer
Method: single particle / : Ozorowski G, Derking R, Sanders RW, Ward AB

EMDB-6250:
CH103 Fab in complex with BG505 SOSIP.664 Trimer
Method: single particle / : Ozorowski G, Derking R, Haynes B, Kwong PD, Sanders RW, Ward AB

EMDB-6251:
CH106 Fab in complex with BG505 SOSIP.664 Trimer
Method: single particle / : Ozorowski G, Derking R, Sanders RW, Ward AB

EMDB-6252:
VRC01 Fab in complex with BG505 SOSIP.664 Trimer
Method: single particle / : Torres JL, Ozorowski G, Derking R, Sanders RW, Ward AB

EMDB-6256:
A native-like SOSIP.664 trimer based on a HIV-1 subtype B env gene
Method: single particle / : Pugach P, Ozorowski G

EMDB-2672:
35O22 Fab in complex with BG505 SOSIP.664 Trimer
Method: single particle / : Lee JH, Pancera M, Kwong PD, Connors M, Ward AB

EMDB-5918:
Negative stain reconstruction of PGT151 Fab in complex with BG505 Env with transmembrane region
Method: single particle / : Lee JH, Blattner C, Wilson IA, Ward AB

EMDB-5919:
Negative stain reconstruction of PGT151 Fab in complex with JR-FL Env with transmembrane region
Method: single particle / : Lee JH, Blattner C, Wilson IA, Ward AB

EMDB-5920:
Negative stain reconstruction of PGT151 Fab in complex with cleaved IAVI C22 Env trimer containing the transmembrane region
Method: single particle / : Lee JH, Blattner C, Wilson IA, Ward AB

EMDB-5921:
Negative stain reconstruction of PGT151 Fab in complex with the soluble Env trimer BG505 SOSIP
Method: single particle / : Lee JH, Blattner C, Wilson IA, Ward AB

EMDB-2427:
Negative stain Electron Microscopy of BG505 SOSIP.664 gp140 in complex with PGV04
Method: single particle / : Sanders RW, Derking R, Cupo A, Julien JP, Yasmeen A, de Val N, Kim HJ, Blattner C, Torrents A, Korzun J, Golabek M, de los Reyes K, Ketas TJ, van Gils MJ, King CR, Wilson IA, Ward AB, Klasse PJ, Moore JP

EMDB-5723:
Negative stain Electron Microscopy of Bg505 SOSIP.664 in complex with sCD4 and 17b
Method: single particle / : Sanders RW, Derking R, Cupo A, Julien JP, Yasmeen A, de Val N, Kim HJ, Blattner C, Torrents A, Korzun J, Golabek M, de los Reyes K, Ketas TJ, van Gils MJ, King CR, Wilson IA, Ward AB, Klasse PJ, Moore JP

EMDB-2241:
Negative stain reconstruction of PG9 Fab in complex with HIV-1 SOSIP gp140 trimer
Method: single particle / : Lee JH, Julien JP, Cupo A, Moore JP, Wilson IA, Ward AB

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more